Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYSAVIVKPKRNVFAVLDIGTTKIICLIVKVSGNFNYKITGTGYKIAEGINGGLITDIKYASYSISSTIGLAEQVSEETIDQIYVNIAGCGILSFNVHNEIIAANHEISDRDIKRVIFQTFEKYIEENVIIHNIPLRYHLDDMTDIREVSGLYGKRLSADVNVVTASRPALTNIENCITNNSGISMAGCIASAYSAGFACLSEDEKELGTAIVDIGGGCTAIGIFKRSKLIYANSIPIGGVHITRDIAYGLCTSIEHAERIKILYGSTVVTSIDENEYITVQSNENDEQARIPKSELVDIIRPRIEEILELVKEQFRKQKDPINK---------VVITGGTSRLASMKEIASYIFNKQVRIGCPESYGGLD-------GEYNKNPVFSAAIGSIKLIVDTFYKNNPDMLGQDGKISKLYHWVKSKVTV |
4A2B Chain:A ((189-392)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDVSAVLDTSFEESERLIITHGNAVYNDLKEEE-IQYRGLDGNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGC---YANSDRPSIINADEVANDPSFAAAFGNVFAVS------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4A2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -110037 for 1534 contacts (-71.7/contact) +
2D Compatibility (PS) -20115 + (NN) -3957 + (LL) 14864
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -132895.0 ( -86.63 by residue)
QMean score : 0.492
|
|
|