Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDEDLELLKFYYEVGIDCTLTEGNEEKKVEKEKNSKAIQSPTIQAEVQKKEQQSMFPSDWIIEARKLASKCNSMDELRSAVKSFEGCEIKKTSTNTVFSDGNQSAKIMLVGEAPGANEDLKGIPFCGASGMLLDKMLSAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVEKHIALISPHILILVGGISCYSLLDNTK-TISTLRGRFHTYTNQYLSYSITTAVI--FHPAYLLRQPAQ--KRLAWEDLKKIREYLNSTNNCTGV
1L9G Chain:A ((8-188))
--------------------------------------------------------------------------MEIVSERVKKCTACPLHLNRTNVVVGEGNLDTRIVFVGEGPGEEEDKTGRPFVGRAGMLLTELLRESGIRREDVYICNVVKCRPPNNRTPTPEEQAACGHFLLAQIEIINPDVIVALGATALSFFVDGKKVSITKVRG-------NPIDWLGGKKVIPTFHPSYLLRNRSNELRRIVLEDIEKAKSFIKKE------
General information:
TITO was launched using:
RESULT:
Template:
1L9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122088 for 1415 contacts (-86.3/contact) +
2D Compatibility (PS) -19358 + (NN) -12928 + (LL) 5820
1D Compatibility (HY) -16000 + (ID) 3200
Total energy: -167754.0 ( -118.55 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1L9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L9G-query.scw
PDB file :
Tito_Scwrl_1L9G.pdb
: