Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLSIYVTLSISLVLILLQVTVTFKDWDSYKEYIVQGLEKTYNAKVHIGGKVEVSLITPKLTVHNVYMQCNNNKEQKLSTLIGVNKIEVRPSILSLFLFSLQPKSITLLGMKSNRENFINIINAKTSSNAVDIVIKGSQVSLNNNFTD--YDNIVNIEKVAIGKSKQFSGEIRVDSNDYDFSGKVNITKKNVHISVESN-FINLLFTGKKNQAGLQGKLTLTINNSSDFINDLAKITNLSFLAYVIPGENIEISSNIDFNGNDFTATDLKIKSKSMQASGIIQNDRKSNHTNINISFSKVNLDSIRNSSRRIIDIKDLLECFRKVVPRNLSLDFNIEASNIQYQNKILDKSHAILKFADGEIKVDMLLKFPGTNNVSHLSGKVSNSGTLSEFNGNLLVKGDNFKSFISCFFPSIKIKGNQKNQFTLSSELHFAPRILSISNIRFLNDKEFLQGSIKVSHTKKHNVVGGRFSVHNLDADKYDYSLFSSLSKMGWLKNLRYDVSIKINANDFKLNDTKIKDLDFLLKMEKGKLVVDKINLSGEDCDINGSTKILVDQRYTKPLLEVNLTGNKFNGDIFKLPSFIEVKRDSRNKINQIQWSTKQFDFLDNKESFDANVQINAIEFRVGQNVLKDFNLDAVVRNNTVTMRQVSYALEHGQVFFQGYLRSDSMYTKFLITNLDAKGIGKAIGIDNVDGRISLNGEIKAQGKSFHGWANNLSGEINLQAQEIEFTNVDFNSFITNLLNGKNKSEISTLAHDDIYNGSTLFENVIGKANIKNGVCSTSLQFRIDQASGSISSNLTLPNFALISLVRFFFILPGHSSPIYIDMHLDGPIWHPKMNFDVDQIFSTLKRIRSIKFIFAK |
2QK7 Chain:B ((20-104)) | ----------------------------------------------------------------------------------------------------------------------------KTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKAAGNIN---SGYEKPNPNDYDFSKLYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLTAFSETINYKQESYRTTLSRCTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQIRWNGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKETENNK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10511 for 340 contacts (30.9/contact) +
2D Compatibility (PS) -8529 + (NN) 1419 + (LL) 37804
1D Compatibility (HY) 400 + (ID) 1550
Total energy: 40055.0 ( 117.81 by residue)
QMean score : 0.099
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