Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDYEEIFLNKIKDIKEEGRYREFTHFASLPGRLPYIMDCERNREVIVWCSNNYLGMSQNESVVAAIQNS----SVGAGGTRNISGTTKEVVELEQSLACLHNKEAALTFACGYLANQTTLSTLSSVIPDVVIFSDEKNHSSMIEGIKSGKRPKHIFKHNNVDHLEQLLKSVDRKTPKIIAFESIYSMDGDIAPLREICNLADQYNAITYLDEVHAIGMYGLRGGGIAEREGLMDRVTVIQGTLSKAFGVMGGYIASSKSLVDVIRSSAPGFIFTTAMSPVLAAAAKASVEHLKSSNVEREKQRQVVEKVKNSLSSVGINFIPTETHIIPIIIGDPELSKRASKLLFDEYGVYVQHINYPTVPRGTERFRITPTPYHTDEMIEHLTESLIKVFVKLSVSVACLC |
| 3A2B Chain:A ((43-392)) | -------------------------------------------RRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMG--RNDYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLGGFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDHGFDLGATESPILPIFIRSNEKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183874 for 3126 contacts (-58.8/contact) +
2D Compatibility (PS) -38077 + (NN) -18273 + (LL) 4344
1D Compatibility (HY) -20000 + (ID) 5400
Total energy: -261280.0 ( -83.58 by residue)
QMean score : 0.571
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