Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSVIEITSIKRRFCAYLIDMAVLLIPNLLIIILLKNFPLILDLLYMCVNCSYFTYFISSAAQATPGQQLMNIHTISLDGSKINLSLAFDRSISQFFLHLLNNVIAILIELFQEQNELVSALIILGVIMLLLTICWYLVACFSQEKQTYHDMLFDTIVVKGAIK |
| 3J7Z Chain:W ((15-41)) | ---------------------------------------------------------------DSEAKR-LGVKRF--GGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J7Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2929 for 104 contacts (28.2/contact) +
2D Compatibility (PS) -2738 + (NN) -184 + (LL) 9916
1D Compatibility (HY) -800 + (ID) 100
Total energy: 9023.0 ( 86.76 by residue)
QMean score : -0.170
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