Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSPISIKETNADQLPNEKGTRYKENKEYFYTSLKNEAIGVVITGLFITAAVMVPSVVGAVIYGIIAVLVVITTILHAIISTLSSYREMEENKVEHVNSQAIKI |
2LOK Chain:A ((1-34)) | MSPIPLPVTDTDDAWRARIAAHRADKDEFLATHDQSPIPPADRGAFDGLRYFDIDASFRVAARYQPARDPEAVELETTRGPPAEYTRAAVLGFDLGDSHHTLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6138 for 129 contacts (47.6/contact) +
2D Compatibility (PS) -3399 + (NN) 511 + (LL) 0
1D Compatibility (HY) -400 + (ID) 400
Total energy: 2450.0 ( 18.99 by residue)
QMean score : 0.185
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