Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSQKGVDLAKSKKDISKFETASSNQKKEW--ETD---SKKKAEEIERLKTLKKKSDEELQEARGKLAEQERLLKYPEAEKSKRCCSIIYCSTYRGTS
4BY9 Chain:C ((190-256))
-------ELGLSEEKIKKILEAKEKTMGAWMDQTDIEVVRQLAEEIDRLYQLRKKLEDYIDRAMDDVAPNLKALVGAKLAARLISLAGGLRELAMMPS
General information:
TITO was launched using:
RESULT:
Template:
4BY9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11263 for 213 contacts (52.9/contact) +
2D Compatibility (PS) -6669 + (NN) -1786 + (LL) 356
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -1436.0 ( -6.74 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_4BY9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BY9-query.scw
PDB file :
Tito_Scwrl_4BY9.pdb
: