Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSFCVKAPAKINLFLHVVEKKETGYHLIEGLFVFANLSNFLEIKVGEKDFRYDNPIVEFVNSELKISNKY---NTVMRAVNLLLRHAPVRTKVTVKVVKNIPTSAGLGSGSSDAGAVIRTLGKLW--KIDRPILNEIALSVGADVPASIDSKPVLVRGIGEELCYINKFSLPTNIVLAKPKKKFLSTPEVFSKYGGNFSKPIEWRDDTE-KDLLKLLKETE-----NDLQEIAISLVPEIRDVILALESQEGSILSRMSGSGVTCFGIFDSEENAKTAAVNIREKQPEWWVCDAQLIV |
| 1UEK Chain:A ((5-246)) | -------APAKVNLGLSVRFRREDGYHELHTLFAPFSLADRL--------------VVEPVSSGLHFQGPYGRENLAYRAASLYLEAAGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVD---LFALARTLGADVPFFLLGRGAEARGVGERLKPLALPPVPAVVFFPGLR---VPTPLVYRAV-----RPEDFGPDLPVEAILEALARGEEPPYWNSLEGPAFRLFPELKEVRGRMRAL-GLRGVLMSGSGSAFFGLAEGPDHARRAAEALRAWGRAWAGTLGGG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136896 for 1869 contacts (-73.2/contact) +
2D Compatibility (PS) -25096 + (NN) -6910 + (LL) 1616
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -185336.0 ( -99.16 by residue)
QMean score : 0.458
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