Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSLYLRSHSLSKLNSSLFAVNNNQNVEPRSDISTGLFKLKNSVYPPTFTMGSHLSNNKILPLYCQNHGHDNMQYYNIIIWITTMLKA
3NQI Chain:A ((13-38))
----------------------------------AGVVKVNDRMGYVTFTDA---AGTELIPTNTIPVTLNARMAYIYCQVDEGQKSI
General information:
TITO was launched using:
RESULT:
Template:
3NQI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4869 for 114 contacts (42.7/contact) +
2D Compatibility (PS) -2827 + (NN) -665 + (LL) 1900
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 1377.0 ( 12.08 by residue)
QMean score : -0.143
(partial model without unconserved sides chains):
PDB file :
Tito_3NQI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NQI-query.scw
PDB file :
Tito_Scwrl_3NQI.pdb
: