Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNGTVNKVILVGNLGRNPEIRTMQNGKEMANFSIATSEGWTDKFSGVRSEKTEWHNIVIFSEGLVKVVKDFVRKGSKVYIEGSLKTRKWTDQNGSERYTTEVVLQNFNGTLTLLDSRNNAASSDYKSNEYKQDETGQKDQYENFDSEVKEELIDDEIPF
1EYG Chain:A ((2-113))
-ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVV-NVGGTMQML---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EYG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52334 for 683 contacts (-76.6/contact) +
2D Compatibility (PS) -11986 + (NN) -1938 + (LL) 1952
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -79556.0 ( -116.48 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1EYG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EYG-query.scw
PDB file :
Tito_Scwrl_1EYG.pdb
: