Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVMNTYAKSGVDLKLYNKLMKEVKLVVDENKREEVISEVGSFSALFDFAALSKKYDHPVLVSSTDGVGTKLLIAQEVDKHDTIGIDLVAMCVNDLLAQGATPLFFLDYFATGALNKDVLLSVVQGITEGCKQAKITLVGGETAEMPGMYGNNHYDLAGFVVGVVDKSKILPNYGVMRAGDYIVGLESSGIHSNGFSLVRHIFEDL-GISYNDLSP-WDNQLWGEVLLKPTKIYVDSLLPIMSQ---VKGIAHITGGGLIDNVPRILPKNLFADVDISSLEWPDIFLWLTKEGKVEKREMLRTFNCGIGMILIIDPENMQGVKNHFQKLGEKIEIIGKLNEKYNPSFNGVVS |
| 3M84 Chain:A ((9-314)) | -----YEDAGVNIEAGNQAVERMKQHVKKTFTQDVLTGLGSFGSLYSLKNIINNYDDPVLVQSIDGVGTKTKVAVMCGKFENLGYDLFSAATNDIVVMGAKPITFLDYVAHDKLDPAIMEELVKGMSKACAECGVSLVGGETAEMPGVYQAGEIDMVGVITGIVDRKRII-NGENIKEGDIVFGLSSSGLHTNGYSFARKLFFDVAGNKHTDTYPELEGKTIGDVLLEPHINYTNIIHDFLDNGVDIKGMAHITGGGFIENIPRVLPQGLGAQIDKDSFATPAIFKLMQRIGDISEFEMYRSFNMGIGMTIIASQDQFDKMQELAKKHTNTKLYQIGKITNSGKVEII--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M84.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233935 for 2464 contacts (-94.9/contact) +
2D Compatibility (PS) -32056 + (NN) -11188 + (LL) 428
1D Compatibility (HY) -27600 + (ID) 5900
Total energy: -310251.0 ( -125.91 by residue)
QMean score : 0.462
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