Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFEWNTNNIIDATGGRGKSGCHNLNISTDTRNIKKGDLFIALKGKNFDGHDFLHEAFLKGAAAAVVSEDKYRNLPVIVVQDTLKALHDMASYYIRNVLVNAEVIAITGSVGKTTTKDMLHTVLSQYGVSHVNDGNLNNNIGLPLTILKAPENCRYLILEMGMNKAGEIKELSKISNPNIAVITNIEPVHVENFSSLFDIAQAKLEILYGVKNNGTLILNKDNKYYDYLLSHVDRDVVSFGRSESATVCLLNVIKNDKGLNLKIRLNNNQIMNCNLCVQGKHFVYSVLAVVAVIQNLGLNLSKLPLALENFNITKGRGSVHKAKYNGKCIHLIDDSYNASPASMKAAIRTL-GIYSNR--RKVALLGDMLELGNKSITFHMKLLDSIVKYDVDKVYTVGKFMLKLHRLLPGNIKGTHF------NDSNQLKSNLANIVQN---NDVVLVKGSRGVKMDFIVQGFIIEY |
| 2AM1 Chain:A ((32-452)) | ----------------------------DSRLIGTGDLFVPLKGAR-DGHDFIETAFENGAAV-TLSEKEVSNHPYILVDDVLTAFQSLASYYLEKTTVD--VFAVTGSNGKTTTKDMLAHLLSTRYKTYKTQGNYNNEIGLPYTVLHMPEGTEKLVLEMGQDHLGDIHLLSELARPKTAIVTLVGEAHLAFFKDRSEIAKGKMQIADGMASGSLLLAPADPIVEDYL--PIDKKVVRFGQ--GAELEITDLVERKDSLTFKANFLEQAL---DLPVTGKYNATNAMIASYVALQEGVSEEQIRLAFQHLELTRNRTEWKKAA-NGADI--LSDVYNANPTAMKLILETFSAIPANEGGKKIAVLADMKELGDQSVQLHNQMILSLSPDVLDIVIFYGEDIAQLAQLASQMFPIGHVYYFKKTEDQDQFEDLVKQVKESLGAHDQILLKGSNSMNLAKLVESLEN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272966 for 3366 contacts (-81.1/contact) +
2D Compatibility (PS) -44642 + (NN) -13878 + (LL) 2384
1D Compatibility (HY) -28000 + (ID) 7200
Total energy: -364302.0 ( -108.23 by residue)
QMean score : 0.518
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