Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGNLSGTVDEVYGDHIILNVNDVGYIIYLSAKALNVCYIGSKIKLLIETCANNRENTTQLYGFINKEEQSCLRLLVKVSGVSYKTAMSILSKLTPEQLFLAIMNEDKIAL-KISGLGPKLINRIITELSGKVSKLETNNNNFYPINEDAVSALINLGY---EKTKVYDTIKKYKPNLDTKDIIRTALKELSNYEIDIMQ
2ZTC Chain:A ((17-209))
MIASVRGEVLEVALDHVVIEAAGVGYRVNATPATLATLRQGTEARLI--TAMIVREDSMTLYGFPDGETRDLFLTLLSVSGVGPRLAMAALAVHDAPALRQVLADGNVAALTRVPGIGKRGAERMVLELRDKV----------HAVRSPVVEALVGLGFAAKQAEEATDTVLAANHDATTSSALRSALSLLGKA------
General information:
TITO was launched using:
RESULT:
Template:
2ZTC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140940 for 1280 contacts (-110.1/contact) +
2D Compatibility (PS) -18838 + (NN) -4050 + (LL) 936
1D Compatibility (HY) -7200 + (ID) 2600
Total energy: -172692.0 ( -134.92 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_2ZTC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZTC-query.scw
PDB file :
Tito_Scwrl_2ZTC.pdb
: