Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVHKNVVEFFLNQELNISDPDKDGWTSLHYAVQRGCLEVVKFLARKGKSINVENAYGSKPVHRAASGGHKNVVEFFLIKE
2BKK Chain:B ((59-133))
---HLEIIEVLLKYAADVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYG
General information:
TITO was launched using:
RESULT:
Template:
2BKK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29194 for 550 contacts (-53.1/contact) +
2D Compatibility (PS) -8087 + (NN) -4742 + (LL) 444
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -49429.0 ( -89.87 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_2BKK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BKK-query.scw
PDB file :
Tito_Scwrl_2BKK.pdb
: