Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGIKFLNPVTPSSRGTVLVSKIGLSRGKPEKSLAFGKKSSGGRNNNGRITIRHKGGGHKKKYRIIDFKRNRND-QGVVEKIEYDPNRSGFLALVSYKCDDTKSYILAPQGIKPGDIVMSGSGIDILPGNCLPLKGIPIGSFVHGVELKPGSGAVIARAAGCYAQVVGRDGNYVLLRLRSGQVRLVLSSCKATIGVVSNPDRKNRKLGKAGRSRWLGVRPTVRGVAMNPVDHPHGGGEGKTSGGRHPVTPWGVATKGKKTRKKNKFSDKYIKQLKG
3J5L Chain:C ((7-266))-------PTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYK-DGERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF-GKHPVTPWGVQTKGKKTR-SNKRTDKFIVRRRS


General information:
TITO was launched using:
RESULT:

Template: 3J5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 86641 for 1801 contacts (48.1/contact) +
2D Compatibility (PS) -27329 + (NN) -2151 + (LL) 480
1D Compatibility (HY) 15200 + (ID) 950
Total energy: 71891.0 ( 39.92 by residue)
QMean score : 0.044

(partial model without unconserved sides chains):
PDB file : Tito_3J5L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J5L-query.scw
PDB file : Tito_Scwrl_3J5L.pdb: