Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIENNLQDLKRKFNYIERKLENPTNLSQKEFIN-LSKEYSELRPIIKIINEYDTLKKEILDLEEIIKDENSEYDIKELAKEEFFEKQKVLLPQVKAKLKLALLPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYKEASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEE-VDFKIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEIERSTM--RKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHQLEQIIKEGELDEFIEVLISRNEAERLAGES |
| 1GQE Chain:A ((31-359)) | ----------KERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKL------AQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAVL-DGSLDQFIEASLKAGL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 95162 for 2257 contacts (42.2/contact) +
2D Compatibility (PS) -32559 + (NN) -3930 + (LL) 2264
1D Compatibility (HY) 8400 + (ID) 1800
Total energy: 67537.0 ( 29.92 by residue)
QMean score : 0.191
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