Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIHVAIYMLLLCMSAMLYRIAKLSDIYNKALAFNHFSTQVILLITAVSIILDSFFLVDIALLYASVSFISTIALMRLMLL
1OQW Chain:A ((3-24))
-------------------------------------------------------LIELMIVVAIIGILAAIAIPQYQNY
General information:
TITO was launched using:
RESULT:
Template:
1OQW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3547 for 79 contacts (-44.9/contact) +
2D Compatibility (PS) -2205 + (NN) -216 + (LL) 6436
1D Compatibility (HY) -4400 + (ID) 200
Total energy: -4132.0 ( -52.30 by residue)
QMean score : -0.117
(partial model without unconserved sides chains):
PDB file :
Tito_1OQW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OQW-query.scw
PDB file :
Tito_Scwrl_1OQW.pdb
: