Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHKYKNIGYVASESPKSQEVSKLLQ-KLNFINITEENKSEVDLLVVVGGDGLMLHTLHNYVVGNKDIHVYGVNTGSVGFLMNKYFSSSEDLIDNIEHATSAQLTLLKMEAIDLSGKKYHHVAVNEVYVF-RKANQIVEMNVAINSKLKMEKFRGDGIILSTPTGSTAYNFSAGGPILPLNSNLFALTSINSYYPRHWNGALISNDTIVQIDINNAQNRPALVVSDYKELHNISQIKMQKDHENTVTLLFDKDYSLDERIFDRQFLY
1SUW Chain:A ((7-209))
---YKTDGHVK----RIEEALKRLEVEVELFNQPSEELENFDFIVSVGGDGTILRILQKL---KRCPPIFGINTGRVGLLTH---ASPENFEVELKKAVE-KFEVERFPRVSCSAMP-DVLALNEIAVLSRKPAKMIDVALRVDG-VEVDRIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECFILIPIAPFR-FGWKPYVVSMERKIEVIAEK-----AIVVADGQKSVDFDGEITIEKSEFPAVFFKNEKRFRNLFGKVRSIG-
General information:
TITO was launched using:
RESULT:
Template:
1SUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101142 for 1482 contacts (-68.2/contact) +
2D Compatibility (PS) -22140 + (NN) -6789 + (LL) 1120
1D Compatibility (HY) -18000 + (ID) 2950
Total energy: -149901.0 ( -101.15 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_1SUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SUW-query.scw
PDB file :
Tito_Scwrl_1SUW.pdb
: