Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFIQIEETPNPNTLKFLPGFA-ILNERETADF--SNPDE--IKNSKLAADLF-QIEHVIRVFFGHDFISVTKSDGISWDILKVEILTTVMDHFTSGGKALDRKGVNDNNIPDEEFFDENDIEIVNRIKELMENYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLCYHIPEVSGIETTL
2LTL Chain:A ((17-119))
IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVESLMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKE---------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LTL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58749 for 666 contacts (-88.2/contact) +
2D Compatibility (PS) -10771 + (NN) -7693 + (LL) 5184
1D Compatibility (HY) -8400 + (ID) 1550
Total energy: -81979.0 ( -123.09 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_2LTL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LTL-query.scw
PDB file :
Tito_Scwrl_2LTL.pdb
: