Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSGINNFMNEVLFFKIFYVPFIILLVAFGYIFLTLRFKFLNIRMFKHAFTILCGKYDTDHHDGHITHFQAFVIALSSTVGLGTVAGVAIAVSMGGPGAIPWMMITGFFGMSAKFAEVTLAFRHRTEGQEQLFSGPFQYIRNGLEEFGFKKLGIILAAVYAVFFVLSGLGGSVAFQTNQMVSILSGYSNWVDSHPW---FLSSIISALLALVIIGGIRRIARVSSALVPVMSLIYIFSCI-TIITFNIHNFSNVFKILFSNMIDFNAVGGGVVGAFVAGIQRAIFASEAGVGSASITHAVAKDEEPVRTGLVAMIEPCFDTMLICCLTGIT-IVITGAYQ-TGIGEGILVTQKAFETVSS-WFPIFLIIAAPLFAFSSVISFVYCCEMGWLYLFGAK-----------SIVIYRIAVVVVAFFSG--L-S------KDIMAIANIGGTLFSCLALINMTALILFSSQINDEVQCYSKRLRNNKIN |
| 3L1L Chain:A ((7-380)) | --------------------------------------------------------------AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGG-IAIYGWLVTIIGALGLSMVYAKMSFLDPS------PGGSYAYARRCFGPF----LGYQTNVLYWLACW-----IGNIAMVVIGVGYLSYFFP-ILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA-----------------AI----QSTLNVTLWSF---IGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVS--ASPFG-DAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -383700 for 3062 contacts (-125.3/contact) +
2D Compatibility (PS) -34839 + (NN) -5238 + (LL) 7932
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: -429445.0 ( -140.25 by residue)
QMean score : 0.371
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