Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTRFAPSPTGYLHVGNARTALVCWMYTRSQNGKFLLRFDDTDLQRSDVKHIDSIVQDLRWICIDWD---------VIFKQSERFKHYNEVFLQLITKGHIYACYETKEELDIKRKLQLKHGLPPVYDRSALLLTEQEKFCYEQEGRKPHFRFKLDRNEVVKWNDEVKGEINIATSSISDPVVKREDGIYTYMLPSVIDDVDFNVTHVIRGEDHVTNTAVQIQMIQALEAKVPVFAHLPL-LHFDDSKISKRKGGLDIKSIKENEIEPMALASYLIKLGTSDPIEAYVNMQSLIDSFDIKKFGSASAQFNLSEIHKLNSKVLQQMPFEMVKERLSQIG------VNSPEFWYF---IRNNIEKFSEVAEWWQICKSNIEPVVLDKEFIKIVLDALPQGDCNENTLSEWVKAIQ-------QTVDIKLKDL-----------FMQLRLALTGAKTGPELAKLLIFIGKENIIARLKKY |
| 3AFH Chain:A ((29-480)) | ---RFAPSPTGHLHVGGARTALFNWMFARKEGGKFILRIEDTDTERSSREYEQQILESLRWCGLDWDEGPDIGGDFGPYRQSERLEIYREYAEKLVEDKRAYYVVYDKED-----------------PSKELFTTYEYPHEYKEKGHPVTIKFKVLPGK-TSFEDLLKGYMEFDNSTLEDFIIMKSNGFPTYNFAVVVDDHLMRISHVFRGEDHLSNTPKQLMIYEAFGWEAPVFMHIPLILGSDRTPLSKRHGATSVEHFRREGILSRALMNYLALLGWRVEGDEIFTIEEKLQSFDPKDISNKGVIFDYQKLEWVNGKHMRRIDLEDLKREFIEWAKYAGKEIPSVDERYFSETLRICREKVNTLSQLYDIMYPFMND---DYEYEKDYVEKFLKREEAERVLEEAKKAFKDLNSWNMEEIEKTLRDLSEKGLASKKVVFQLIRGAVTGKLVTPGLFETIEVLGKERTLKRLERT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201648 for 3179 contacts (-63.4/contact) +
2D Compatibility (PS) -43814 + (NN) -17611 + (LL) 2308
1D Compatibility (HY) -28000 + (ID) 6650
Total energy: -295415.0 ( -92.93 by residue)
QMean score : 0.475
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