Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSDDKEERLLSEKHKSNPSMAVKWQRNIFTKTESQSSSKLYLVDLAKKSHKIISTPTSAYLPDWSHF
2P4N Chain:K ((217-233))
------------------------------TQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNI
General information:
TITO was launched using:
RESULT:
Template:
2P4N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 59 for 34 contacts (1.7/contact) +
2D Compatibility (PS) -1732 + (NN) 892 + (LL) 2028
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -1353.0 ( -39.79 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_2P4N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P4N-query.scw
PDB file :
Tito_Scwrl_2P4N.pdb
: