Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQVKKNRINEFITAKEVRLVDHNGEMVGVVSIGRALTFAQNVGLDLVEVAPDSIPPVCKILDYSKQKYDAKKKASEAKKKQKTLTIKEIKLGPNIGDHDYETKLRHARDFLTHGHKIKVTMKFKGRELINTEVGLEKLERLIRDTEDIAKIESAPKREGNQYFLALTTK |
1J6V Chain:A ((111-154)) | ----------------------------------------------------------------------------AGHDQPIPGVSELECG-NYRDHDLAAARQHARDVLDQGLKVQETILLE--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1969 for 177 contacts (11.1/contact) +
2D Compatibility (PS) -4585 + (NN) 88 + (LL) 8976
1D Compatibility (HY) -2400 + (ID) 800
Total energy: 3248.0 ( 18.35 by residue)
QMean score : 0.300
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