Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIIKTIEEKIRGSIDVIDVDIIDESVKHADHYFSSSSMLPSHIKLVLISDNFAGMDSLKRHRLIYELLKSEIEL-IHAISLHLYTQSEYNLKNK
3TR3 Chain:A ((32-79))
------------------------------------------HFEAVVLCPTFEGQTALTRHRLVYNALGSHMQSDIHALSLKTYTPDEYER---
General information:
TITO was launched using:
RESULT:
Template:
3TR3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33689 for 260 contacts (-129.6/contact) +
2D Compatibility (PS) -5075 + (NN) -2398 + (LL) 3108
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -43504.0 ( -167.32 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_3TR3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TR3-query.scw
PDB file :
Tito_Scwrl_3TR3.pdb
: