Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILISLLFILIFYSSANAFTLDDKLRDKNMEKRATNLFEMIKCPICSGESLSESGSQVAYNMRKMIREKISDGY--TDEQITSEL--RNSYGDSIIIVPPVKFSTYILWLIPLVIPLIGCFLIRNIIK
3I61 Chain:A ((273-355))
--------------------TLDDKV-----QKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKI
General information:
TITO was launched using:
RESULT:
Template:
3I61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3468 for 302 contacts (11.5/contact) +
2D Compatibility (PS) -8312 + (NN) 720 + (LL) 2620
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -8254.0 ( -27.33 by residue)
QMean score : 0.100
(partial model without unconserved sides chains):
PDB file :
Tito_3I61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I61-query.scw
PDB file :
Tito_Scwrl_3I61.pdb
: