Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSVTFILPDGSKKSYEAAEGETLLNLAHRSDPDL-LEGACEGSLACSTCHVIIDQNFYDAVETHNPISDEENDMLDLAFSLTETSRLGCQIKITKDIDGLCVTIPKGTRNISLDKQGND
2JQR Chain:B ((5-105))
--TVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLE---AITDEENDMLDCAYGLTDRSRLGCQISLTKAMDNMTVRVP--------------
General information:
TITO was launched using:
RESULT:
Template:
2JQR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59187 for 732 contacts (-80.9/contact) +
2D Compatibility (PS) -10910 + (NN) -3995 + (LL) 180
1D Compatibility (HY) -10800 + (ID) 2400
Total energy: -87112.0 ( -119.01 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2JQR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JQR-query.scw
PDB file :
Tito_Scwrl_2JQR.pdb
: