Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLSKYKNQSVAVFGLGKTGLSVINVLIKSGAKAYAWDDSKEQMANAKTMYKECNFIHPKKYDWHEIKALILSPGVPISYPKPHWIVKLARSFDCKIKSDIELFLEAKAKNQKIVGVTGTNGKSTTTSLIGHILKSAGKKVAIGGN----LGVP--ILDLEKDAEIYVIEI-SSFQLELINMPAVIPVHDHTFFSGSQYRAAWMIKRVSEMTKKMTEVTKRMAGMIKVDISVLLNITLDHIDRHGSMENYIAVKSKL---IGGSKVAVIGCDNEITADIFNKFTGNKIPISGVRSLLDDKKGAEI--QEISLKLENHNLS------ASDAKINLTS--NAENIAASCAVCKLLKVDSSTIIDGIKSFSGLKHRNELLGKIENVLFVNDSKATNAESSKKA---ILSYKNIYWIVGGRSKEGGIESLSKHFARIRKALLIGESTEVFASTMENKVDYVRCCNLEDAFRLAFEEAIKSKEKTTILLSPACASFDQWRNFEERGEAFCRMFEKLRDSFTITRVV |
4QDI Chain:A ((121-388)) | ----------------------------------------------------------------------------------------------------------------KVIALTGSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVPMMLLELRKEHQYAVMELGANHQGEI----------DYT------------------------------SKIVQPHVAGILNIGTAHLGEFGGRDGICRAKSEIYRHILPQGVAIVPQQDDFTAEIREAAKSHQIMSFG--------EGGDVFATEIELLPQSANFQLHTPQGSSFVRLPFAGEHNVQNATAAVAFALALGVSLEDIVKGLEQAQGAKGRLNFIQKAPH-LFIDDTYNANPTSMRAAAQVLLQQNGIKVMVMGDIGELGDSSWQEHHDLGRDLAELPLDHIVAVGQFASAALEGAGLHSTKLKAFQTQAEALPFLINLIQTHQPQSMSFLFKGSRFTHMETLMADLMEK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92477 for 1904 contacts (-48.6/contact) +
2D Compatibility (PS) -26008 + (NN) -1776 + (LL) 13828
1D Compatibility (HY) -14800 + (ID) 3600
Total energy: -124833.0 ( -65.56 by residue)
QMean score : 0.367
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