Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSQSPKRMYGTGNNFVIIDSRSINNLNWN--YREIANQN---GCDQIIVITNSSAADCFMH--IYNADGGEVEMCGNAARCVGYLIMSEKSTEYATIELVNKRILECFKVGGRSI---------KVNMGKPLFKWHEIPLSA-KCDPLHLPIELEMLKDPVAVNIGNPHMVFFVDNISEIPLQSLGPKLEKHTLFPKKVNVNIAQVEKSGEISLRVWERGTGITASCGSAACAALIASVLRGYLITRQTSVNLPGGKLLIEW--PDN-IFMTGDIGFL |
| 4IJZ Chain:A ((5-262)) | -------KMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKG--------LTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQG-LLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187421 for 1924 contacts (-97.4/contact) +
2D Compatibility (PS) -25988 + (NN) -5631 + (LL) 984
1D Compatibility (HY) -14800 + (ID) 4650
Total energy: -237506.0 ( -123.44 by residue)
QMean score : 0.383
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