Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNTGLTNNDILDDIVSSDLSAMKNFIFRDVNNGDVKLAADIISHLVRSGGKKVRPKLVFIICKMLNYS-GEDRVKVAASVEFIHNATLLHDDVLDESEARHGVKTANKIWGNKSSILVGDLLLTLAFRWLIECGNLNILSILSGASHSLVNGEIKQMAARFNSHTIRKNYFDIIGKKTASLFSACCEAASVISNATSNETERLKNFGLNFGMAFQIIDDTLDYTADQRTSGKQVGKDFFEGKVTLPAIIAYEKGSPAEQKFWEKCFSLAE--RNFDQALHYINHHNAIQLSIEKARHYVNMAQNNINTFSDSSYKIALIDFLNASIERQA
3LMD Chain:A ((45-348))-----------VEELLHTELSSGEDFLV------------DIVMHLTRAGGKRFRPMFALLASEFGEKPLSENVIKAAVVVEITHLATLYHDDVMD-----------NARWDNSVAILAGDILLAHASGLMSQLGT-DTVAHFAETFGELVTGQMRETVGPRDTDPI-EHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFS--------PGTDLREGVFTLPVLYALREDTPVGAELRDILTGPLEDDETVNHVLELLSQSGGRQAALDEVYRYMDIANAELDRLPDSTVKEALRNLATFTVKRVG


General information:
TITO was launched using:
RESULT:

Template: 3LMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155804 for 2250 contacts (-69.2/contact) +
2D Compatibility (PS) -29305 + (NN) -4945 + (LL) 2112
1D Compatibility (HY) -16400 + (ID) 4050
Total energy: -208392.0 ( -92.62 by residue)
QMean score : 0.436

(partial model without unconserved sides chains):
PDB file : Tito_3LMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LMD-query.scw
PDB file : Tito_Scwrl_3LMD.pdb: