Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIADRKRSVKQKSDKNNLVGNLDIIKTAGEISLQKGLDFEVIMKALESAIEAVAYQKYGSKSKVVVNIDRSTGEVISYRELKVVDD--EPNGEEHNGYGSITLTQAKLIKEDAKVGDTI-NELLSLNTDLASARIAQQRIAQVIKYEELKKQYEEFKDKVGEIRYGIVKQVEYSDLIIDINGTRAYLPLRNLIGGELFREGDKIKAYIQTVKRSDDGRQIILSRASEGFLEALLSQEIPEIADGLVTVKGIARDAGSRSKVAVFSPDKNIDPVGACVGVKGERIKAIIHELNGEKIDVVHYFSDLGQFVIKAITPAEVSKVIIDESENCVELIVAEDQLSLAIGKKGQNVRLASELIGWKIEILSTQQESERRNRELSQCSALFAEALNLEEIMGQLLVTEGFSSVEDISNASIKELASIEGFNEDIASELRNRANRYLKAENDRKIEELKSLGMESDVINLPLSIDDKIALSEHGIKTLENIADLSSYEFCSILSSSASDKENLKNTVNSIIMEARKKLGVI |
| 2KWP Chain:A ((2-119)) | --------------------NKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVQIDRKSGDFDTFRRWLVVDEVTQPTKE-------ITLEAARYEDESLNLGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMLVPR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KWP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20876 for 776 contacts (-26.9/contact) +
2D Compatibility (PS) -13092 + (NN) -8193 + (LL) 27744
1D Compatibility (HY) -5200 + (ID) 1950
Total energy: -21567.0 ( -27.79 by residue)
QMean score : 0.518
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