Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVENEGVLLVLSSPSGAGKTTILERLLERST--NLVRSVSMTTRKPRPGEINGKDYFFVTKKEFHELCEAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLLSIDWQGAFHLFELMREK---VISVFILPPSMEELRLRLQKRNSDSASEIEHRLAEAQKEMSKRDKYDYVVINDDIDKSVEEISSILDKERLKRSGV
1S96 Chain:A ((15-203))
-----QGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGA----QQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQ
General information:
TITO was launched using:
RESULT:
Template:
1S96.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84496 for 1351 contacts (-62.5/contact) +
2D Compatibility (PS) -21216 + (NN) -17730 + (LL) 1052
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -142690.0 ( -105.62 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_1S96.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S96-query.scw
PDB file :
Tito_Scwrl_1S96.pdb
: