Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYDFKNVEKFYQDRWD----FSIGKNNEQGKCYVLEMFPYPSGKIHMGHLRNYVIGDVIARYKRACGFEVLHPIGWDAFGLPAENAARDNNVNPAAWTKENIDNMRAQLKSIGLSYNWERELSTCEADYYKHEQKFFLDFLKQGLVYRKKSWVNWDPIDQTVLANEQVVDGKGWRSGAIVEKRELSQWFLKITDFAEDLLECLQGLENWPEKVKMMQDRWIGKSEGVTIEFKIVGLNKKLKVFTTCPHTLFGASFCAVAIEHPIVQDLM--SKEIQDLISSIK--IQGKNNEKVGIYTGLNVKHPFLDKELPLYVANFVLMEYREGAIFGCPAHDQRDFEFAQEYDLPIIPVISSARLGIIPACDQGSYTGSQCQATRMADGLNEEYTNNSIMFNSEFLNGLTVSEARKVIVEKLEEKGIGKKTINYRLHDWGVSRQRYWGCPIPVIYCKNCGTVPVPEEDLPVTLPTDVDFTSGGNPLDKHPTWKFVNCPKCKEQAERETDTFDTFFESSWYFAAF-CSENKS--IDKNACNRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCGYFNVKEPFSTLITQGMVC--HVTYKDKNGK--WLFP-------EEAKRLI----TQGAKIQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSNDGVEGCSRYINKLWRMVMQFKP---VVILNQSPVKQVADTEIQKEDMLSHAGMIPDKNVTGKFLGYRKKIHKLLHGLTDDL-ENCRLNCVVAKFREMTNLIAE--IDVKTGKSLINEGICILIRVVEPFIPHLAESLWREIGGEGMLYLQPWPKAAKSLLIDDVVTVAVQINGKLRATIEVAINLHQEELKQIAINS--VSNRVDQSKVRAVYAVSNKIVNIVT |
| 3ZJT Chain:A ((24-878)) | -QYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAV------------------------------EIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNPELAAFIDECRNT------EKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAA-------------DGSEPDLSQQA------LTEKGVLFNSGEFNGLDHEAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGMP--ALRETDTFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTAKGDVAALNVD-----ALTENQK--------------------ALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAPTDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZJT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -508029 for 6339 contacts (-80.1/contact) +
2D Compatibility (PS) -83479 + (NN) -21642 + (LL) 4212
1D Compatibility (HY) -70800 + (ID) 17500
Total energy: -697238.0 ( -109.99 by residue)
QMean score : 0.475
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