Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDNIIIITGITASGKSELCDNLIKKYGNISIVNCDSKQVYKEIPIITAQPPKQEEF---YRLYGCVPAKENYSVGLWLEDLKGEVDHALENARMPIITGGSGLYISSLINSLSPIPKVSEEIRKNVSELRKNLSKEEFYKLVLSKDSKIQGKISTNDLHRLSRALEVITATGKSIF-VWQESRQLPLFDNFKIYTILPKREDVYRKINSRFVTMIESGAVDEVKKLLN-MNLAPHLPAMRAHGVPEIIKY------LKGKITLSEAIQIAQTNTRHYAKRQYTWFKNQFPNSEVIDCANKLIEFEIF |
| 3EPH Chain:A ((4-289)) | ----VIVIAGTTGVGKSQLSIQLAQKF-NGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERKLTRKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRRVQRMLEIYYKTGKKPSETFNEQKITLKFDTLFLW-LYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQCENGVWQVIGFKEFLPWLT--VKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLDATDLSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131058 for 1935 contacts (-67.7/contact) +
2D Compatibility (PS) -28670 + (NN) -16011 + (LL) -76
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -197365.0 ( -102.00 by residue)
QMean score : 0.556
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