Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFVNGGQLKKINQKWLIIGTGLLLFMMML-----PSIILLAKMTIGLVMVLVVAIAIKIASKTISNVLEDKQADPNQLTSQTTQSRIINLAVGLVSIFTGGLSLLIIAKTGIAVICAAVVTLAIYEYAKDYKYAEDKEIGKSINDKLDEIAKNTTNFIVSGIEKLVSPQEQQV |
3B5Y Chain:A ((156-209)) | -----------------------LFIMMFYYSWQLSIILV-------VLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66758 for 1128 contacts (-59.2/contact) +
2D Compatibility (PS) -4956 + (NN) -1464 + (LL) 2316
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -77762.0 ( -68.94 by residue)
QMean score : ?
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