Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLSVIGIKEPVSNKQLYEHCDIRII-FTKRDVIPVPRHWDPEDSITN-------GHTKQLYNKNWIPVSRTGMTG---------KGFEMTESNTGKLVHDRKLLFISSDIKSFFFAIRIE
3RI3 Chain:B ((82-161))
---------------------CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH
General information:
TITO was launched using:
RESULT:
Template:
3RI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4105 for 308 contacts (13.3/contact) +
2D Compatibility (PS) -6043 + (NN) 3902 + (LL) 1600
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -1536.0 ( -4.99 by residue)
QMean score : -0.001
(partial model without unconserved sides chains):
PDB file :
Tito_3RI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RI3-query.scw
PDB file :
Tito_Scwrl_3RI3.pdb
: