Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKSGGGSCNGRDSAGCRLGIKKNG--KVIPGNIIVRQRGTKFHPGKNVGMGKDHTIFAKVEGWIRFR-KSVNKKTFIDIVPVDNV
4CSU Chain:Y ((6-81))
------GGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE---
General information:
TITO was launched using:
RESULT:
Template:
4CSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4348 for 436 contacts (10.0/contact) +
2D Compatibility (PS) -7571 + (NN) -1354 + (LL) 748
1D Compatibility (HY) -4800 + (ID) 2100
Total energy: -10729.0 ( -24.61 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_4CSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CSU-query.scw
PDB file :
Tito_Scwrl_4CSU.pdb
: