Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSWARSSAILMLSTFAAGYQEEVLTLMEKEEEEFLSHEQVKALLEKIRGEVLKTPIWHNVMDPVDDFVGRVMN
1LOX Chain:A ((584-630))
----KQSSLQMSIVWQLGRD--IMVPLGQHQEEYFSGPEPRAVLEKFREELAIMDKEIEVRNEKLDIPYEYLR
General information:
TITO was launched using:
RESULT:
Template:
1LOX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2125 for 173 contacts (-12.3/contact) +
2D Compatibility (PS) -4758 + (NN) -1441 + (LL) 688
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -11036.0 ( -63.79 by residue)
QMean score : 0.156
(partial model without unconserved sides chains):
PDB file :
Tito_1LOX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LOX-query.scw
PDB file :
Tito_Scwrl_1LOX.pdb
: