Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSHESIEKNLNFVKKLNNVNDSVLKIENLALAYDNKKVLDGINISIEKGDIVTILGPNGGGKTSLMKVVAGISKNYTGSV-IFADNIK---------ISYMPQNFSISKLMPITVEY--FLLNSFSKKLKKNQSVITEVIELVGIGSILKNQVLEISAGQMQLLLLAHCLIAEPDLIILDEPVSAMDI-NARAKFYDIIGEIAKKRLISILMTSHDLSSIVPCSDYIICINHTIYCQGKPGKIMEDRTLGEIFSSYIAK 1VPL Chain:A ((18-240)) -------------------------VKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQ-GIEYLRFVAGFYASSSSEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAR-EVRKILKQASQEGL-TILVSSHNMLEVEFLCDRIALIHN--------GTIVETGTVEELKERYKAQ

General information: TITO was launched using: RESULT: Template: 1VPL.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -193811 for 1651 contacts (-117.4/contact) + 2D Compatibility (PS) -22579 + (NN) -9632 + (LL) 2424 1D Compatibility (HY) -16400 + (ID) 3400 Total energy: -243398.0 ( -147.42 by residue) QMean score : 0.538

(partial model without unconserved sides chains): PDB file : Tito_1VPL.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1VPL-query.scw PDB file : Tito_Scwrl_1VPL.pdb: