Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYGTTILSIRKDKSVIVIGDGQVSLGHTVIKSGAKKVRRLSSDSVIAGFAGATADAFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEP-EDGIAAIGSGGNFALSAAKALIDIKGISIEEIAKKAMKIAADICVYTNHNVVVEKIEG
1OFI Chain:G ((1-172))
---TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELFERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQILAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEELPN
General information:
TITO was launched using:
RESULT:
Template:
1OFI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130468 for 1473 contacts (-88.6/contact) +
2D Compatibility (PS) -19223 + (NN) -13441 + (LL) 128
1D Compatibility (HY) -18000 + (ID) 5250
Total energy: -186254.0 ( -126.45 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_1OFI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OFI-query.scw
PDB file :
Tito_Scwrl_1OFI.pdb
: