Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNLWKKGTDFLGSEFAIMGGAMSWVSERNLVSAISNAGGFGVI-ACGAMSSDLLEKEIIETQKLTNKPFGVNLITMHPN-----LSELIDVCIETKVSHIVLAGGLPVKPNIEKIKNVGIEVMCFAPSLSLAKRLVKMGVDALIIEGMEAGGHIGPVSTSVLSQEILPYFKDE-RVPVFVAGGIGRGEMIVNYLEMGASGCQIGTLFVCTNESIAHKNFKEVFIKSAARDAISSVQISADFPVIPVRAIANKASDDFMQYQKEIIDKYHKGQISKEDGQLEIEKFWAGALRGAVI--EGDIETGSLMAGQSVGMVDKEKPVKEVIDILIQQASNYIESKSVKVGDLIISKASS |
| 2GJN Chain:A ((9-320)) | ---------TETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNL-TLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPGE-HIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGH--PGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPA-----VKAAIR---AADERSTDLIMRSLRNTARVARNAISQ---EVLAIEARGGA----GYADIAALVSGQ-RGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222411 for 2703 contacts (-82.3/contact) +
2D Compatibility (PS) -31965 + (NN) -8116 + (LL) 2624
1D Compatibility (HY) -11200 + (ID) 4700
Total energy: -275768.0 ( -102.02 by residue)
QMean score : 0.545
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