Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYNEKILDHYENPRNVGSLDKNDPSVGTGLVGAPSCGDVMKLQIKVNDKGVIEDAKFKTFGCGSAIASSSLLTEMIKGKTIEDVTKIKNTQIVEEL-SLPPVKVHCSVLAEDAIKAAIHDYQSKHSKNES
4EB7 Chain:C ((2-123))
--YSDKVFDHFQNPRNVGKIEDAD---GVGTV---VCGDLMTIYIKVKDN-RIEDIKFQTFGCAAAIATSSMATEMAKGKTIEEALKITRDAVAEALGGLPKQKMHCSNLAADALRRAIVDYFRKNGKIDK
General information:
TITO was launched using:
RESULT:
Template:
4EB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31601 for 987 contacts (-32.0/contact) +
2D Compatibility (PS) -12528 + (NN) -3517 + (LL) -136
1D Compatibility (HY) -9200 + (ID) 3250
Total energy: -60232.0 ( -61.03 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_4EB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EB7-query.scw
PDB file :
Tito_Scwrl_4EB7.pdb
: