Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEYQGVNTVKKDRKPITITANAVERIRYLLDQKQYTNLERSEEAIGIRVLIKQKGCSGLKYDIEYAYDIHPLESVIEESCSDGQKVKVLIDPKSVMFILGSEMDYVEEKFSSGFVFKNPNEKGKCGCGESFHV
2D2A Chain:A ((18-122))
----------------LTLTPAAAIHIRELV--------AKQPGMVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEH---DGAKLFVPL--QAMPFIDGTEVDFVREGLNQIFKFHNPKAQNECGCGESFGV
General information:
TITO was launched using:
RESULT:
Template:
2D2A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37650 for 674 contacts (-55.9/contact) +
2D Compatibility (PS) -11235 + (NN) -2307 + (LL) 1008
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -60084.0 ( -89.15 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_2D2A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D2A-query.scw
PDB file :
Tito_Scwrl_2D2A.pdb
: