Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEEINIMNDFTNNNNSSDSSIFQGKICPEDLNKAQEVNELKGVTEELFKKIELQKQEYEGLGKEASSEIQGMFTPVMLGDDNPTDGGIVEETLAELGKFFQSLLSEFEIELDPKTYEMINGKREKNWLAAIIKFLHDKLKELVEKVFSCDLSFDERVDKEIKELEEKLLSGGFSKEEEVAVLGKLEALRELKLKLQMAVAGWIVAMVAEIFAVELVVAAEGTGTAKEEDKKAEKTSSKKEVEVCKEIGIKVGED-EKLRI-LPISLFLIPARGQSNRLIIPPLKPEEQNLLRDSLKKMI--HGPEHDVNRENCEVKETKVEENKQVEELIAVRPTASGQPATNSMELKDTQRDNSDWKEMKGQGKNNTCKKTLRQSNRGFVSNDNTSRRPAQSSVFSRETPEQLAQEYVFNGEASTQHATKSVSNRGSSGQPMKGSVVGSEYDFSTWSNAEYEAQQSSVNNAQPTSECNDVKVNNHVNSMGRAQGEAQSR |
| 4DBQ Chain:A ((338-413)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNKSTQALEYCAEL---LGLDQDDLRVSLTTRVM-------------VPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DBQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5432 for 267 contacts (-20.3/contact) +
2D Compatibility (PS) -6311 + (NN) -3693 + (LL) 19224
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -1462.0 ( -5.48 by residue)
QMean score : 0.434
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