Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDDKKTTIEEEKGILGWIEYRLPIFSFLKHTASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDHAFNSVERIMRDVNYGWLIRYTHAVGASLFFMVVYVHMMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGATVITNLFSAVPLVGNKIVMWLWGGFSVDNPTLNRFFALHYLLPFVIIALAMLHIIALHRFGSGNPSGVEVKSG------KDTIPLYPYYIVKDCITFGLFFIVLFAFVFYAPNYLGHPSNYIEADSMVTPVHIVPEWYFLPFYAMLRS------------------IPDKLTGVLTMFGSILVWFLLPWLDKAKVKSGAYRPLFKKFFLVFAVNFAFLAWLGGQEVKEPYITLSRLSTLYYFAYFMVVLPLLSKYEKPEELPKTISDSVPEMK |
| 2YIU Chain:A ((10-427)) | ---------EPKTGFERWLHRRLPIVSLVYDTLMIPTPKNLNWWWIWGIVLAFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIHIFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGVGEAIQTWLLGGPAVDNPTLNRFFSLHYLLPFVIAALVVVHIWAFHTTGNNNPTGVEVRRGSKEEAKKDTLPFWPYFVIKDLFALAVVLVVFFAIVGFMPNYLGHPDNYIEANPLVTPAHIVPEWYFLPFYAILRAFTADVWVVMLVNWLSFGIIDAKFFGVIAMFGAILVMALVPWLDTSRVRSGQYRPLFKWWFWLLAVDFVVLMWVGAMPAEGIYPYIALAGSAYWFAYFLIILPLLGIIEKPDAMPQTIEEDFNA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -324131 for 3034 contacts (-106.8/contact) +
2D Compatibility (PS) -40605 + (NN) -21015 + (LL) 664
1D Compatibility (HY) -62400 + (ID) 11450
Total energy: -458937.0 ( -151.26 by residue)
QMean score : 0.408
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