Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVDIVFRYKDDYNEFVKLLDLKKHSYICRSRQDEKGSDVLLKHMHDKKDRATIKMLMPNKCAVFVSKDRANKFIKNTLKIEVEVLSS
2LD7 Chain:B ((478-494))
---------AEAYENFLRCLVIFNQE--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2265 for 59 contacts (38.4/contact) +
2D Compatibility (PS) -1825 + (NN) -1652 + (LL) 5644
1D Compatibility (HY) -2400 + (ID) 150
Total energy: 1882.0 ( 31.90 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_2LD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LD7-query.scw
PDB file :
Tito_Scwrl_2LD7.pdb
: