Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKEKYSFKEVENKYNILWEDSRVYKWDGKKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLGKDIFYPIGFDDNGLPTERLVEQTYKTRAREVG---REKFIEMCHEVIEKSKQEFKELLRSVGISYDWSLEYHTISKETVTLSQMSFIDLYNKGYAYRKMQPILWDPVDKTAIAQAEIEDKVCESSLNTITFSTEENEQIDIA-------TTRPELFLACVAVFCHPE--------------------DARYAHL-------------IGK-----TSVVPIIGVKVPIIADGRVKIDKGTGLVMCCTFGDELDIYWQQKHNLPMKIIIDQDGKINLDSMYDNNRSQYQGIGMTGERSTGVIKEGAISPHYDVIPVRNTRIYDEINGLKVKEARKKIIKILTERGLLTGSTNISHSVKCAERSGVSLEILPTYQWFIKTLDQKAQVLDKVKECNWYPSTMRKRMEVWIEGLNWDWCISRQRYFGVPFPVWYSRRKGEEGKVILAE-----VEDLPVD---------PLKDL-PKGYSKE-----EVVPDQDVMDTWATSAITPQLSALAVNSEFSLPDHRYNTIFPADLRSQSHEIIRTWAFYTILKAYYHANSLPWKNIMVSGWCLADDKKKMSKSKGNIITPKSILDTYGADVVRYWTANSRLGVDTVYSENILKIGKRLVTKLWNASKFVSIFMERYQAVSINSVSET----MDQWILSKLYKVIEKATNNLLQFEYCEALGAVEGFFWKDFCDNYLELAKKRAYGDKVSSKANLSAKQSLTYVLNTILRLLAPFLPYITEQIYHQL--YSDNSVHNRGNWPNKEELIYDKHSEEMGDKFMQILNLV----RKIKADNNVSV--KHLIKKLMIKANVKEDKLNQSAQNDLQTVCNAEMIEWSENAQAGLITENGKFIVSIDLY |
| 1FFY Chain:A ((45-840)) | -----------------------------KGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDF----RRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHDKRSASIYVAFNVKDDKGVVDADAKFIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAEALDWDKASIKLEKEYTGKELEWVVAQHPFLDRESLVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQQYELPVISPIDDKG------VFTEEGGQFEGM-----------------------------FYDKAN--------KAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNMVRDRG-EWVISRQRVWGVPLPVFYA----ENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVWFDSG-SSHRGVLETRPELS---------FPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDDYRKIRNTLRFMLGNINDFNP-DTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTAEEVWSHTPHVKEESVH-LADMPKVVEV-----DQALLDKWRTFMNLRDDVNRALETARNEKVIGKSLEAKVTIASN---DKFNASEFLTSFDALHQLFIVSQVKVVDKLDDQATAYEHGDIVI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FFY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -287806 for 5604 contacts (-51.4/contact) +
2D Compatibility (PS) -75344 + (NN) -16239 + (LL) 6464
1D Compatibility (HY) -30800 + (ID) 10800
Total energy: -414525.0 ( -73.97 by residue)
QMean score : 0.350
|
|
|