Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKFAILFSILLAIVAYHLNNEVAFEVARLFSGIFISLLKLISLPLVFLSIVSTISGLKDSIEIKTLVKKTLFYTLLTTIIAAFVALSFYLLIDPVRKNFISNTIESASNSNYNYFSYLKL-LIPSNFMQVFLKNNTIGSILIAFLMGRAIISLPKGKQDILHQVFSALFDT-------LLKIAQWLLKFIPLAVWSFITCFLHELKGGSEFYSLLWYFACIMSANSVQAFLILPLLMWCKGISPIQTLRGVMPALTLAFFSKSSSATLPTTIDCVQNKLKVPKKLSSFILPICTTINMNACATFILITVMFVAEMNGCTFSLSEIFIWIFLATGAAIGNAGVPMGCYFMATSYLVSMNVPL--------YIMGLILPIYTIIDMFETAINVWSDVCVTQIINKEYKGEI |
| 2NWX Chain:A ((21-414)) | -----ILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYY-LLTSAFAVTLGIIMARLFNPGAGIHLAVGGQQF-----PPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAE-QGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMR-VAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAM--ILGIDAILDMGRTMVNVTGDLTGTAIVAKTE---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2NWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -416570 for 3265 contacts (-127.6/contact) +
2D Compatibility (PS) -38872 + (NN) -17139 + (LL) 844
1D Compatibility (HY) -28800 + (ID) 5050
Total energy: -505587.0 ( -154.85 by residue)
QMean score : 0.340
|
|
|