Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYQYYNRIFNILLIIVLLLSNVTYADASESMHQIGSDIVVGLLKTEKETYPHELGLFQSIYEMFNSFGVRTVFIDCNKIINLKKIQEELLSLLKQDEMLAKKLILDRIKIEIGQFIKGHKINRIFIPENYYNLHSEPFPPTPCCQLVTEAIVKIVDDNPTIHLLSICGGLQGIMSAKGIEVVHVENFVSDEEQRRSHLKSAPNPQQEDVTFQQIKIVPNSHLAKVVAKFLLPDKNGWFSTCFPDAHSGTVNNRPENRRKLELLGYKIAAFSNDGVIEAIEDK-HGNIYFQSHPEALVVKSDKNLHLSNHKARQVSTLVAMAIINDFLYRA |
2A9V Chain:A ((11-191)) | ----------------------------------HHMLKIYVVDNGG-------QWTHREWRVLRELGVDTKIVPNDID---------------------------------SSEL--DGLDGLVLSGGAPNIDE--E-----LD-KLGSVGKYIDDH-NYPILGICVGAQFIALHFGASVVK--A-KH---------P--------EFGKTKVSVMHSENIFGGLP----------SEITVWENHNDEIINL--------PDDFTLAASSATCQVQGFYHKTRPIYATQFHPEVEHTQYGRDIFRNFIGICASYREIQKE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106036 for 1505 contacts (-70.5/contact) +
2D Compatibility (PS) -18774 + (NN) -1055 + (LL) 9988
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -123177.0 ( -81.85 by residue)
QMean score : 0.389
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