Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKEERTMTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYHGQPLVVVCHALTGNHLTYGT----DDYPGWWREII-DGGYIPIHDYQFLTFDVIGSPFGSSSPLNDPHF----PKKL---------------TLRDIVRANERGIQALGYDKINILIGGSLGGMQAMELLYNQQFEVDKAIILAATSRT---SSYSRAFNEIARQAIHL-----GGK-------EGLSIARQLGFLTYRSSKSYDERFTPD--EVVAYQ--------QHQGNKFK----EHFDLNCYLTLLDVLDSHNIDRGRTDVTHIFKNLETKVLTMGFIDDLLYPD----DQVRALGERFKYHRHFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK |
| 3I1I Chain:A ((44-372)) | ---------------------------------------------VILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNL-----CNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNPIITSVNVAQNAI--EAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3I1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -175303 for 2254 contacts (-77.8/contact) +
2D Compatibility (PS) -29111 + (NN) -13134 + (LL) 3080
1D Compatibility (HY) -17200 + (ID) 3700
Total energy: -235368.0 ( -104.42 by residue)
QMean score : 0.396
|
|
|