Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPASILNKSVKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKRVFKGSEYQLSEINSG-------SVKYEQT---YDNFPILNNSKA----MLNFNIEDNKAASYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNNPKIINH |
2QGX Chain:A ((2-77)) | -----------------------------------------------------------------------------------------------------SVQATDRLMKELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVD--SALHNDLQILKEKEGADFILLNFSFKDN--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1162 for 251 contacts (4.6/contact) +
2D Compatibility (PS) -6052 + (NN) 234 + (LL) 13072
1D Compatibility (HY) -6000 + (ID) 950
Total energy: 1466.0 ( 5.84 by residue)
QMean score : 0.143
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